National Center for Biotechnology Information (NCBI) database for Pseudomonas aeruginosa

Giyanto; Elisa  Julianti; Hotnida  Sinaga; Mariani  Sembiring

Giyanto Graduate School of Agricultural Sciences, Faculty of Agriculture, Universitas Sumatera Utara, Medan, Sumatera Utara, Indonesia
Elisa Julianti Department of Food Science and Technology, Faculty of Agriculture, Universitas Sumatera Utara, Medan, Sumatera Utara, Indonesia
Hotnida Sinaga Department of Food Science and Technology, Faculty of Agriculture, Universitas Sumatera Utara, Medan, Sumatera Utara, Indonesia
Mariani Sembiring Department of Agrotechnology, Faculty of Agriculture, Universitas Sumatera Utara, Medan, Sumatera Utara, Indonesia

Keywords: pseudomonas, aeruginosa, ncbi, oil palm, biotechnology

Abstract

The present study describes search National Centre for Biotechnology Information (NCBI) databases (GQuery) on Pseudomonas aeruginosa. NCBI databases search (https://www.ncbi.nlm.nih.gov/) was employed to generate a number of valuable information. Results found in 31 databases for Pseudomonas aeruginosa. All databases of Pseudomonas aeruginosa consist of literature, genes, protein, genomes, clinical and pubchem. The literature contained bookshelf, MeSH (Medical Subject Headings), National Library of Medicine Catalogue, PubMed, and PubMed Central. The genes consists of gene, geo datasets,gep profiles, popset. Proteins feature contained conserved domains, identical protein groups, protein, protein family models and structure. Genomes included Assembly, BioProject, BioSample, Genome, Nucleotide, SRA, and Taxonomy. The clinical contained clinicaltrials.gov, clinvar, dbgap, gtr, medgen and imim. The pubchem consist of bioassays, compunds, pathways, substances. The present work provides essential information relating to biotechnology of Pseudomonas aeruginosa.

References

Basyuni M, R Hayati, B Pratomo and Lisnawita. 2019. National Center for Biotechnology Information (NCBI) database search for rubber plant Hevea brasiliensis.IOP Conference Series: Earth and Environmental Science, Volume 260, International Conference on Agriculture, Environment, and Food Security 2018 24–25 October 2018, Medan, Indonesia. DOI 10.1088/1755-1315/260/1/012171
Pratomo B, Lisnawita, T C Nisa and M Basyuni. 2021. The bioinformatics of projected acetyl-CoA carboxylase genes in Hevea brasiliensis. IOP Conference Series: Earth and Environmental Science, Volume 713, The 2nd International Conference on Natural Resources and Technology 24 -25 August 2020, Medan, North Sumatra, Indonesia. DOI 10.1088/1755-1315/713/1/012053
Lee J A, E Seong, G Cheah, S Sethupathi and N I M Ismail. 2023. Isolation and characterization of effective microorganisms from palm oil sludge for enhancement of spent bio-adsorbents from aquaculture wastewater treatment. J Matpr 4 542. DOI 10.1016/j.matpr.2023.04.542
Wang Q, Kai Huang, Yizheng Li, Yanling Zhang, Lei Yan, Kaihang Xu, Shaoquan Huang and Muhammad Junaid. 2022. Microplastics abundance, distribution, and composition in freshwater and sediments from the largest Xijin Wetland Park, Nanning, South China. Front Microbiol 108 (13-21). DOI 10.1016/j.gr.2021.07.009
Zhang Guo-liang , Yue-ting Wu, Xin-ping Qian and Qin Meng. 2005. Biodegradation of crude oil by Pseudomonas aeruginosa in the presence of rhamnolipids. J Zhejiang Univ Sci B 6(8):725-730.